94 items found

Tags: Cenozoic Evolutionary Biology

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  • dataset

    Eocene Data (Raw)

    The Eocene data from the Paleobiology Database (www.paleobiodb.org), downloaded 10-09-2013. Please note that this is raw data, un-culled. See the manuscript for a discussion of...
  • dataset

    SUMOHeratoPHASED

    DNA sequence data for the gene SUMO-1 activating enzyme (sae-1) for multiple individuals for multiple races of Heliconius erato. The data is derived from direct sequencing,...
  • dataset

    Lazarus_2012_Paleobiology_Appendices

    Appendices 1 and 2. 1-tabular data extracted from or calculated from the Neptune database for Cenozoic radiolarian occurrences. 2-histograms (pdf plates) of occurences in time...
  • dataset

    Godfrey et al Agorophius matrix

    NEXUS format data file used for phylogenetic analysis.
  • dataset

    pleuroProtGenes.123

    Nexus alignment file with character sets and export block. Includes sequences generate for this study and those retrieved from GenBank.
  • dataset

    ATP6 data set used in bioinformatic analysis

    391 species included.
  • dataset

    Supplementary_Data

    Counts of sites by county for Cenozoic fossil marine invertebrates used to create Figure 1, specifically the number of sites (collections) from the Paleobiology Database...
  • dataset

    rag1 data set used in bioinformatic analysis

    1078 species included
  • dataset

    dedup_wf_001--71979944be26d5f9e4ea60294311b306

    55 most parsimonious tree topologies inferred from total evidence dataset and reduced morphological dataset using the parsimony ratchet (TNT).
  • dataset

    mterato

    DNA sequence data for a sequenced fragment including mitochondrial COI-tRNALeu-COII for multiple individuals for multiple races of Heliconius erato. The data is derived from...
  • dataset

    dedup_wf_001--0415ca4dbba90404d31badf5351e7d30

    Character states for the modified morphological phylogeny originally produced by Prideaux and Warburton (2010; see in paper text for full citation). "1"= Posthypocrstid presemy,...
  • dataset

    Morphological and phylogenetic data for Poseidonamicus populations

    Morphological and phylogenetic data for Poseidonamicus populations
  • dataset

    OSM File S3. Reduced 369 character morphological data matrix

    Reduced morphological data matrix of 369 characters after excluding those characters found to have 0 dissimilarity from the Gower analysis.
  • dataset

    2654eratoPHASED

    DNA sequence data for a Proteasome 54kD subunit protein-coding sequence (referred to as 2654 in the manuscript) for multiple individuals for multiple races of Heliconius erato....
  • dataset

    GPCReratoPHASED

    DNA sequence data for a partial protein-coding sequence of the gene G protein coupled receptor for multiple individuals for multiple races of Heliconius erato. The data is...
  • dataset

    Datasets S1 to S10. Phylogenetic datasets

    Phylogenetic datasets used in our analyses. Each dataset is a nexus file including a tree distribution with 100 trees (except for planktonic foraminifera).
  • dataset

    Miocene Data (Raw)

    The Pleistocene data from the Paleobiology Database (www.paleobiodb.org), downloaded 10-09-2013. Please note that this is raw data, un-culled. See the manuscript for a...
  • dataset

    ND2 data set used in bioinformatic analysis

    1309 species included
  • dataset

    dedup_wf_001--99f22125168cfa8739ccf0c8f314a5d7

    DNA sequence data for a partial protein-coding sequence of the gene bves for multiple individuals for multiple races of Heliconius melpomene. The data is derived from direct...
  • dataset

    Morphological phylogeny

    Modified (see paper text) most parsimonious morphological input tree from Prideaux and Warburton (2010).