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Main SNP file STRUCTURE format
Dataset of 3764 SNP structure file. Population information included in second column. -
BOTHRelW
Relative fitness values collected in the lab via competition between evolved and ancestral strain of P. fluorescens. Column headings are: SelE=selection environment,... -
Additional file 15: of Genome-wide transcriptional adaptation to salt stress ...
Table S9. Primers used for qPCR. (XLSX 11 kb) -
Genotyping Results
The results of genetyping all fish included in studies Genetic diversity of the critically endangered lake minnow -
Myotis_Molecular Diet Data_Clipped
Fasta file containing sequences from ion torrent sequencing faecal samples of Myotis dasycneme and Myotis daubentonii. -
Information for BAM files on NCBI SRA
BAM files for 117 wolves, separated into genic and neutral regions. See paper text for details on alignment and mapping pipeline. -
Pairwise FST Table
Pairwise population FST calculated by hierfstat. FST values are represented between each cluster (k=3), globally between populations, and between populations within each genetic... -
dedup_wf_001--905989f579f0baa9b7c38f16cc2e049f
Data from Table 2. Alpha estimate for three introgressed P. balsamifera regions in P. trichocarpa, one in chromosome (Chr) 06 (region A) and two in chromosome 15 (B and C). -
Sex chromosome analysis
This compressed directory contains the infiles and R script for the analysis to determine if SNPs associated with parallelism between melissa-east and melissa-west populations... -
Additional file 1: of Genes significantly associated with lineage II food iso...
List of 176 isolates included in this study and the associated metadata. (XLSX 23 kb) -
survival_data
We measured larval mortality for S. droebachiensis at 3 different temperatures (3, 10 and 21 °C) reared in 4-l culture jars (n = 3). Temperatures in the jars were maintained... -
Largest SNP dataset statistics results from Stacks
parameters set -m 8 –N 2 –M 4 –n 3 -t. A filtered version of this dataset was used in analysis in paper. This dataset required SNPs occur across 2 populations at 90% to be called. -
dedup_wf_001--417836f8e8784abda81d93cfec196e64
Genotypes for European lines of A. thaliana (Chromosome 1) genotyped at a density of one SNP per kb. These data are used in our tutorial example 2 and supplementary file 2. Data... -
SNP FST file
This is the pairwise fst output for individual snps. The non-informative sites have been suppressed, so all the rows are the SNPs that meet the coverage criteria. the columns... -
Mitochondrial genome annotation Amphiprion frenatus
Mitochondrial genome annotation for Amphiprion frenatus, in csv format. MitoAnnotator and MitoFish were used to obtain the mitochondrial genome annotation. For more information,... -
D. melanogaster median Fst and latitude
D. melanogaster Fst values for pair-wise population comparisons and the latitude of each population. The analysis of isolation by distance used the median Fst (median.Fst) and... -
dedup_wf_001--5d1b6ecd655415f557a1258a51fec142
GenBank accession numbers for each submitted sequence
