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Additional file 8: of Fast and accurate mutation detection in whole genome se...
Running VarScan 2 on our dataset. Computational details and results of running VarScan 2 on the described dataset. (HTML 408 kb) -
Characteristics of the study population.
SD = standard deviation; BMI = body mass index; BFP = Body fat percentage measured with bioelectrical impedance [24]; WHR = waist-hip ratio; HGS = handgrip strength, the highest... -
Additional file 9: of Fast and accurate mutation detection in whole genome se...
Running MuTect on our dataset with default settings. Computational details and results of running MuTect on the described dataset without the tuning of the LOD parameter. (HTML... -
sample_info
Tab delimited text file containing meta data for 240 individual, 40 from each sample. Listed is Sample_ID, Individual_ID, Sex, Total_length, Age, Lat, Lon, Date and... -
Additional file 2: of ClinQC: a tool for quality control and cleaning of Sang...
ClinQCOptions_NGS file to specify all input files and parameters for Sanger sequencing data analysis. (TXT 2 kb) -
Additional file 10: of Fast and accurate mutation detection in whole genome s...
Comparison of IsoMut and MuTect. Comparison of false positives rates when running IsoMut versus running MuTect with a finely tuned LOD parameter. (HTML 373 kb) -
Additional file 1: of Whole exome sequencing in the rat
Table S1. Rat exome-seq 500 flanking bp primer design for validation. (XLSX 20 kb) -
Additional file 1 of From trash to treasure: detecting unexpected contaminati...
This Excel file includes several sheets containing all the details on the data used for the accuracy assessment and the comparison with other tools, and the obtained results.... -
Additional file 7: of Genome-wide characterization of genetic variants and pu...
An excel file with enrichment analysis results including the enriched GO terms from genes located in top 1% regions under selection (INDEL dataset). The enrichment analysis was... -
Additional file 6: of Genome-wide characterization of genetic variants and pu...
An excel file with enrichment analysis results including the enriched GO terms from genes located in top 1% regions under selection (SNP dataset). The enrichment analysis was...
