92 items found

Types: software Tags: 60506 Virology Plant Biology

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  • software

    Code for a microRNA Conservation Bioinformatics Collaboration Between the Van...

    This code repository is a part of the the microRNA conservation bioinformatics collaboration between the Van Vactor Lab and Wall Lab, including Elizabeth M. McNeill, Todd F....
  • software

    UMCUGenetics/IAP: v2.0.0

    New sge module, containing qsub templates which use the new time and mem variables. New karyotypeplot. Seperate markdup settings from mapping settings. Send done email...
  • software

    Replication files for "It's Raining Men! Hallelujah? The Long-Run Consequence...

    This document presents data and programs used to produce empirical evidence presented in the article and in the Online Appendix. Codes for this paper were run using Stata. The...
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    Ncrncornell/Ced2Arspssreader: 1.3.0

    CED2AR SPSS Reader This project contains java classes that will allow you to read several versions of SPSS data sets. It modifies the code originally written by Pascal Heus...
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    r37980778c78--a5d1d340d85a1df29a0e1762013be3bc

    list of implemented technics original regression (MLMR) original classification (MLMC) nearest neighbor MLM (NN_MLM) opposite neighborhood MLM (ON_MLM) fuzzy C-means MLM...
  • software

    The jury is still out regarding the generality of adaptive "transgenerational...

    Code and data needed to reproduce the results shown in "The jury is still out regarding the generality of adaptive “transgenerational” effects" (first...
  • software

    r37980778c78--b43541b1cc70854e9a00ca9b821c0e62

    Initial release of MI-bicliques: Algorithms for enumerating maximal induced bicliques. MI-bicliques is a C++ software package implementing algorithms for efficiently enumerating...
  • software

    r37980778c78--e8bc2a667081fcc4737162dad5500745

    reprounzip-vistrails didn't change) Bugfixes: Fixes error using Docker with--enable-x11 on Python 3 Enhancements: docker run gets a --detach command, to keep the...
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    r37980778c78--1e88594c4086dd7e54ff3079b42e6cc2

    Behavior changes: reprounzip will no longer run on Python 2.6 Bugfixes: Fixes file download not using cache if URL is HTTPS Fixes unpacking with directory or chroot for...
  • software

    rsofun

    Version of rsofun used for Stocker et al. (2020) GMD. Wraps the SOFUN model (separate repository!) though input/output writing via files. No direct wrapping of the FORTRAN code...
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    Gklyne/Annalist: Annalist Release 0.5.8: Subproperty Uris, Field Description ...

    This release mainly adds support for sub/superproperty URI relations declared in view field definitions. This is intended to make it easier to work with structured vocabularies...
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    r37980778c78--f5062bf6ac5079c39371b42fa4dcaf47

    GenerateAG.m is a short MATLAB script that calculates a restricted generalized inverse AG using input data from an atmospheric photochemistry mechanism. The inverse problem...
  • software

    r37980778c78--a3d356232a48b9dea10b29c7bef0c2a2

    This is the first release of CRes and contains: source code and documentation for CRes high-resolution .pdf files for figures from Watson et al. (2019) JVGR article script...
  • software

    NationalGenomicsInfrastructure/piper: v1.4.0

    The release notes for this release are available here: https://github.com/NationalGenomicsInfrastructure/piper/releases/tag/v... This release "re-tags" 70eb84f to allow Zenodo...
  • software

    Graphit-Dsl/Graphit: Initial Release To Make The Artifact Available For Oopsla18

    Initial release to make the artifact available for OOPSLA18.
  • software

    neurostuff/NiMARE: Initial release

    Release Notes This is NiMARE's initial release. NiMARE is still alpha software, so the package may change dramatically from release to release and there may be bugs in the code....
  • software

    Poldracklab/Fmriprep: 1.0.12

    Release Notes A long overdue release. This release integrates the great work of @mgxd to provide results in the CIFTI/grayordinates format for surface-based analyses. It also...
  • software

    r37980778c78--a0bcf6504cc06193de8c60b36be72a9d

    This Julia code is accompanying the paper Decompounding discrete distributions: a non-parametric Bayesian approach by Shota Gugushvili, Ester Mariucci and Frank van der Meulen....
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    r37980778c78--222602e8cc0b5c6ee00d4ab7d574f7be

    What's Changed Migrations catchup (#651) @adelavega Have report tooltip follow same display rules as rest of anlysis buil… (#647) @rwblair Bump werkzeug from 0.12.1 to 0.15.3...
  • software

    Data and outputs for Selene manuscript case 2

    Case 2: Developing a new architecture and comparing performance across architectures. chromatin_profiles: ENCODE and Roadmap Epigenomics profiles used in DeepSEA (Zhou &...