40 items found

Types: software Tags: Genetics code

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  • software

    r37980778c78--809cbc8f848ba323336bade7d1409fb2

    This repository includes the code, data, documentation, metadata and figure source files that accompany this research.
  • software

    Code for a microRNA Conservation Bioinformatics Collaboration Between the Van...

    This code repository is a part of the the microRNA conservation bioinformatics collaboration between the Van Vactor Lab and Wall Lab, including Elizabeth M. McNeill, Todd F....
  • software

    Analysis pipelines included in "Conbase: a software for unsupervised discover...

    This repository contains the analysis pipelines included in "Conbase: a software for unsupervised discovery of clonal somatic mutations in single cells through read...
  • software

    r37980778c78--3093914004a99391a5c1a6b0e94e533b

    Initial release of the code used in the papers "On the interaction between Autonomous Mobility-on-Demand systems and the power network: models and coordination algorithms" by...
  • software

    r37980778c78--9be7c958ebd22a290ad21292358e62de

    This release contains all the code to create the results and plots for the paper "Spectral deferred corrections with fast-wave slow-wave splitting" by Daniel Ruprecht and Robert...
  • software

    r37980778c78--8825b14220b458338630b7b59edeb06d

    The purpose of this package is to provide the code necessary (along with Matlab) to reproduce the figures and tables in the publication "Region of Interest X-Ray Computed...
  • software

    r37980778c78--f12f6ee5b9dfe7396e8498fc5106d62a

    This (in progress) repository includes the code, data, documentation, metadata and figure source files that accompany this research.
  • software

    FUImaging: Neuroimage2014 release v2 - more improvements

    This package supplements our recent paper on automatic image segmentation using Non-negative Matrix Factorisation (NMF) [1]. This release adds bugfixes and adapts the regNMF...
  • software

    psu-inversion/atmospheric-inverse-methods-for-flux-optimization: Initial pape...

    Codebase at the time of the initial submission of the first paper. This should be complete, but there may need to be a last few tweaks before the code and paper are ready.
  • software

    r37980778c78--a3bccda0b76d5b574167202b535d89b1

    Code for estimation of seed, recruit and seedling dispersal models using data from the Barro Colorado Island (BCI) forest dynamics plot. See README.md file in repository for a...
  • software

    Role of the quasi-particles in an electric circuit with Josephson junctions (...

    This the codes and data used to produce results of the article Role of the quasi-particles in an electric circuit with Josephson junctions. It is a new algorithm to from...
  • software

    r37980778c78--5f47dce6e6b28ad7798b61bf59bc4756

    Opportunistically collected photographs can be used to estimate large-scale phenological trends This is the code used the above analysis. The preprint for the manuscript is...
  • software

    r37980778c78--818cb456907266f007cc591fd5da7237

    GRMHD_con2prim is a general-purpose framework that comes with various methods for the recovery of primitive variables from conservative variables in general-relativistic...
  • software

    pybinding v0.9.5: a Python package for tight-binding calculations

    Pybinding is a Python package for numerical tight-binding calculations in solid state physics. The main features include: Declarative model construction - The user just...
  • software

    r37980778c78--829c593d16f225ea29ced3c1b6f46ee8

    Pybinding is a Python package for numerical tight-binding calculations in solid state physics. The main features include: Declarative model construction - The user just needs...
  • software

    Sentinelflow: automated satellite image workflow for Sentinel-2

    Search, download and patch Copernicus Sentinel-2 data into appealing color images. Colors are adapted to human perception and fit for dark oceans as well as bright snow...
  • software

    Predicting the global mammalian viral sharing network using phylogeography

    Data and code to replicate the findings of Albery et al., 2020
  • software

    r37980778c78--c84260cc2f6ed50de6823e0c016b5cb1

    This code has been publicly available and in continuous development since 2017 but for citation purposes I am creating this Zenodo release June 5 2018, in order to obtain a DOI....
  • software

    r37980778c78--bf6e32484e02841d4adbb97f2983b643

    Sample code for the paper on a h-adaptive space-time Discontinuous Galerkin method
  • software

    N-Witt/Collection-Document-Summaries-Ecir-2018: Publication Ready Code

    This Repository contains the code for the paper "Collection-Document Summaries"