150 items found

Types: software Tags: Evolutionary Biology Genetics

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  • software

    r37980778c78--fa33fb4f7a94dbbfee51e8ddfa409803

    Main changes in version 0.6: Rewrite of the code for matrices and linear solver, including block Toeplitz matrices for symmetric bodies and hierarchical matrices. Clean up of...
  • software

    Code for a microRNA Conservation Bioinformatics Collaboration Between the Van...

    This code repository is a part of the the microRNA conservation bioinformatics collaboration between the Van Vactor Lab and Wall Lab, including Elizabeth M. McNeill, Todd F....
  • software

    The Turing Way: A Handbook for Reproducible Data Science

    Reproducible research is necessary to ensure that scientific work can be trusted. Funders and publishers are beginning to require that publications include access to the...
  • software

    r37980778c78--f7dde3d3b54e5c7d40a6876555718931

    The signac framework aids in the management of large and heterogeneous data spaces. It provides a simple and robust data model to create a well-defined indexable storage layout...
  • software

    r37980778c78--6ef4046a680a2c1048890727a3769f23

    "Blaster" is a Microsoft Windows-based sequence processing and analysis tool that provides simple and intuitive graphical user interface to some of the most common tools for...
  • software

    Replication files for "It's Raining Men! Hallelujah? The Long-Run Consequence...

    This document presents data and programs used to produce empirical evidence presented in the article and in the Online Appendix. Codes for this paper were run using Stata. The...
  • software

    Ncrncornell/Ced2Arspssreader: 1.3.0

    CED2AR SPSS Reader This project contains java classes that will allow you to read several versions of SPSS data sets. It modifies the code originally written by Pascal Heus...
  • software

    r37980778c78--1045e55a6ac052b348e15addd162dc69

    tabular-data-gwt-service allows communication between the GUI and services Documentation Documentation is available on-line in the gCube Wiki:...
  • software

    glotzerlab/signac

    The signac framework helps users manage and scale file-based workflows, facilitating data reuse, sharing, and reproducibility. It provides a simple and robust data model...
  • software

    Library of ROCOF Test Waveforms – Pseudo Code

    This document uses pseudo code to define the library of test waveforms for rate of change of frequency (ROCOF) instrument testing. It is intend for illustrative purpose only...
  • software

    r37980778c78--c8736375c0ebcacf64b1d78a6feb9646

    This archive contains the top-level code and dependency specifications needed to reproduce the scientific communications materials for the “A Whole-Brain Map and Multivariate...
  • software

    csadorf/signac: v0.6.2

    The signac framework aids in the management of large and heterogeneous data spaces. It provides a simple and robust data model to create a well-defined indexable storage layout...
  • software

    Gcube 4.1.1 - The Data Transfer Common Objects V. 2.0.1

    The gCube System - The Data transfer common objects -------------------------------------------------- The Data transfer common objects This software is part of the gCube...
  • software

    r37980778c78--0e9d9e4c4018d5e8192c0234a37ead1a

    Computing environment for EFSA opinion  10.2903/j.efsa.2018.5114 in form of a Docker container archive. To create all maps the attached Docker  container archive needs to be...
  • software

    gCube storagehub-client-wrapper

    This is a wrapper of storagehub-client library. It allows to interact with storagehub in a simplified way by exposing several utilities. Moreover, It exposes object as defined...
  • software

    r37980778c78--cb5d9266b51dbe1bee697b9655ce5c44

    The Sequence Distance Graph framework works with genome assembly graphs and raw data from paired, linked and long reads. It includes a simple deBruijn graph module, and can...
  • software

    r37980778c78--d0176e2c289577a722357870c8221bb4

    Supplementary material [ActivityDiagramToOcBaseClassDiagramTranslation.pdf] contains the explanation about how we have implemented our overall translation patterns from an...
  • software

    r37980778c78--f5062bf6ac5079c39371b42fa4dcaf47

    GenerateAG.m is a short MATLAB script that calculates a restricted generalized inverse AG using input data from an atmospheric photochemistry mechanism. The inverse problem...
  • software

    r37980778c78--9d94cdae9e09f1cd8156d6f36c90f5a3

    Sample code to access the two basic EMCal data objects, emcClusterContainer and emcTowerContainer, writing out data necessary to do timing calibration, including walk correction...
  • software

    r37980778c78--feed0e461649512c77b5927a26619c63

    This folder contains R code for a rule-based Buddhist Sanskrit Segmenter and Lemmatiser, as well as data necessary to use and evaluate the Segmenter and explanatory materials....