74 items found

Types: software Tags: Cell Biology Genetics Pharmacology

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  • software

    r37980778c78--01c17f4939fc7a6c992416f6ef44453b

    Overview The swift project management site is now live and ready for use at https://swift-pm.herokuapp.com/. New Features Conda Support Admin Access for GCRF African SWIFT...
  • software

    Replication files for "It's Raining Men! Hallelujah? The Long-Run Consequence...

    This document presents data and programs used to produce empirical evidence presented in the article and in the Online Appendix. Codes for this paper were run using Stata. The...
  • software

    r37980778c78--a5d1d340d85a1df29a0e1762013be3bc

    list of implemented technics original regression (MLMR) original classification (MLMC) nearest neighbor MLM (NN_MLM) opposite neighborhood MLM (ON_MLM) fuzzy C-means MLM...
  • software

    r37980778c78--a9c481c4cecfcd17df0427481fcb6f3d

    [FIX] Adopt new FreeSurfer (v6.0.1) license mechanism (#787) [ENH] Output affine transforms from original T1w images to preprocessed anatomical (#726) [FIX] Correct headers in...
  • software

    labordynamicsinstitute/ldi-replication-dataprep: LDI Replication Lab Data Pre...

    These programs prepare and clean the raw data from the LDI Replication Lab. The output is manually curated on Zenodo, and used for downstream analysis.
  • software

    r37980778c78--761d10f59884115526f46e72de86fcce

    This record collates DOIs for the software components used in 'Automated shape differentiation in the Unified Form Language'. The Firedrake components and dependencies used...
  • software

    Software used in 'Testing'

    This records collates DOIs for the software components used in 'Testing'. The Firedrake components and dependencies used were: COFFEE (A Compiler for Fast Expression...
  • software

    ReproZip: 1.0.5

    (reprounzip-vagrant didn't change) Bugfixes: Correctly download parameters from server More reliable way of determining X server IP without using /bin/ip Downloads:...
  • software

    r37980778c78--db41c430bbba800f4c4de676ad3d064c

    nbgrader version 0.5.5 is a release for the Journal of Open Source education, with the following PRs merged: PR #1057: Ensure consistency in capitalizing Jupyter Notebook PR...
  • software

    r37980778c78--ac9b9bea256b618273d284ce29bd73e8

    See the improved changelog-detailed.md for a detailed list of semantic changes in the EDAM ontology. Summary of changes 20 formats added (listed in changelog-detailed.md)...
  • software

    r37980778c78--977dcd70866f4ec7efa16561232497a2

    This record collates DOIs for the software components used in 'Automated shape differentiation in the Unified Form Language'. The Firedrake components and dependencies used...
  • software

    FUImaging: Neuroimage2014 release v2 - more improvements

    This package supplements our recent paper on automatic image segmentation using Non-negative Matrix Factorisation (NMF) [1]. This release adds bugfixes and adapts the regNMF...
  • software

    r37980778c78--1e9eab8c44414354f10670a159aac769

    This is the analysis code for our paper at https://doi.org/10.1016/j.bbagrm.2019.194444 It was used to generate all figures in the article (report directory).
  • software

    Software used in 'The scaling and skewness of optimally transported meshes on...

    This records collates DOIs for the software components used in 'The scaling and skewness of optimally transported meshes on the sphere'. The Firedrake components and...
  • software

    r37980778c78--0a7428c46866f1500253213b40ef4ffc

    Changes: new tools: index poly wshfl zexp index: generate indices poly: generate polynomial patterns (Siddharth Iyer) wshfl: wave-shuffling (Siddharth Iyer) zexp: replace...
  • software

    ReproZip: 1.0.8

    Behavior changes: No longer default to overwriting trace directories. ReproZip will ask what to do or exit with an error if one of --continue/--overwrite is not provided...
  • software

    r37980778c78--df6f4c2d732393e7174268128a30e75f

    magicCalling v0.0.2 magicCalling is an R package for converting raw marker data into marker alleles. It implements two novel methods.  The first is a model-based clustering...
  • software

    poldracklab/fmriprep: 1.0.4

    Release notes This release fixes minor issues found during Testing Phase 2, and gives a solution to some execution errors derived from Nipype latest changes. CHANGES [FIX] Pin...
  • software

    Object Oriented Internet 5.0.2

    SemanticData ModelDesign Export 5.0.2-Alpha This release: API Browser Object Oriented Internet eBook Changes: SemanticData - updated against OPC UA Specification...
  • software

    Freesasa 2.0

    FreeSASA is an open source library and command line tool to calculate the solvent accessible surface areas of protein molecules. The library is as fast and accurate as existing...