26 items found

Types: software Tags: 69999 Biological Sciences not elsewhere classified Biochemistry Genetics Physiology Plant Biology

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  • software

    r37980778c78--55b9c1afa833f1a094326e6812fe6760

    codebook 0.7.4 Additions Function new_codebook_rmd creates a new file in your working directory with a codebook template. Function metadata can be used to set dataset-level...
  • software

    r37980778c78--a9c481c4cecfcd17df0427481fcb6f3d

    [FIX] Adopt new FreeSurfer (v6.0.1) license mechanism (#787) [ENH] Output affine transforms from original T1w images to preprocessed anatomical (#726) [FIX] Correct headers in...
  • software

    r37980778c78--e3817c00be99f0ab19dd1e7358fa6a67

    v01-09 2019-08-22 Erica Brondolin (PR#53) Include cut in slope in z for CA building part to reduce number of combinatorics In ConformalTrackingV2: configurable via per step...
  • software

    ReproZip: 1.0.5

    (reprounzip-vagrant didn't change) Bugfixes: Correctly download parameters from server More reliable way of determining X server IP without using /bin/ip Downloads:...
  • software

    r37980778c78--e8bc2a667081fcc4737162dad5500745

    reprounzip-vistrails didn't change) Bugfixes: Fixes error using Docker with--enable-x11 on Python 3 Enhancements: docker run gets a --detach command, to keep the...
  • software

    r37980778c78--1e88594c4086dd7e54ff3079b42e6cc2

    Behavior changes: reprounzip will no longer run on Python 2.6 Bugfixes: Fixes file download not using cache if URL is HTTPS Fixes unpacking with directory or chroot for...
  • software

    r37980778c78--db41c430bbba800f4c4de676ad3d064c

    nbgrader version 0.5.5 is a release for the Journal of Open Source education, with the following PRs merged: PR #1057: Ensure consistency in capitalizing Jupyter Notebook PR...
  • software

    YCM 0.1.1

    YCM 0.1.1 (2015-08-28) Release Notes Changes made since YCM 0.1.0 include the following. Build System If available, use the new MESSAGE_NEVER argument for the file(INSTALL)...
  • software

    SI for "A Computational Study of Structural and Excitonic Properties of Chlor...

    files in chapter * are stored in chapter_* folders note for CTubeGen software in chapter_5 folder A software I developed for generating arbitrary chlorosomal tubes,...
  • software

    ReproZip: 1.0.8

    Behavior changes: No longer default to overwriting trace directories. ReproZip will ask what to do or exit with an error if one of --continue/--overwrite is not provided...
  • software

    r37980778c78--102ba23a1838efe7463f342eaba219dd

    v01-08 2019-02-07 Emilia Leogrande (PR#49) Clone checker: if equal length, keep the one with the better chi2 Debug9 prints clone checker info Fix address of the track in the...
  • software

    ReproZip: 1.0.9

    (reprounzip-vistrails didn't change) Bugfixes: Fix CentOS Docker image versions Remove Fedora Docker images, they don't have tar Do include .pyc files in packages, so...
  • software

    r37980778c78--92c18e15ac40b1d5ef2950a737b49a03

    2.3.1 Official Release Many bug fixes and some minor enhancements. Many thanks to the community for reporting, testing, and fixing these issues....
  • software

    r37980778c78--ce680b79a51f4b491454cb32ad15b8c5

    The main purpose of this major version release is a significant restructuring of the way models work to address one of the biggest issues identified by the community: the...
  • software

    r37980778c78--ae6cb80a26e4fb13ae784905c2ef6cd7

    0.5.1 (2018-10-19) dts-calibration is now citable Refractored the MC confidence interval routine MC confidence interval routine speed up, with full dask support Link to...
  • software

    r37980778c78--679d5c4ff0469c859ae8500f3f8179cb

    dvhcalc Implemented DVH interpolation. (#39) Implemented optional user-specified structure thickness for DVH calculation. dvh Fix a bug in absolute_volume if a DVH...
  • software

    CoBMo - Control-oriented Building Model

    New features Controller module. Thermal / battery storage models. Validation script.
  • software

    WrightTools

    The headlining features of this release include: from_Cary will now read data files correctly where multiple objects have the same name Tweaks to how Quick1D presents data...
  • software

    poldracklab/fmriprep: 1.1.7

    Release Notes Several bug fixes. With thanks to Elizabeth Dupre and Romain Vala for contributions. CHANGES [FIX] Revert FreeSurfer download URL (#1280) @chrisfilo [FIX] Default...
  • software

    r37980778c78--338befade422009ddafb08d00274305b

    Changes: new tools: casorati mandelbrot wavelet estshift estdelay ccapply cc tool: new option to output compression matrix traj tool: new option for gradient-error corrected...