228 items found

Types: software Tags: 69999 Biological Sciences not elsewhere classified Biochemistry Genetics

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  • software

    r37980778c78--fa33fb4f7a94dbbfee51e8ddfa409803

    Main changes in version 0.6: Rewrite of the code for matrices and linear solver, including block Toeplitz matrices for symmetric bodies and hierarchical matrices. Clean up of...
  • software

    Software used in 'Discontinuous Galerkin discretization for two-equation turb...

    This record collates DOIs for the software components used in 'Discontinuous Galerkin discretization for two-equation turbulence closure model'. The Firedrake components and...
  • software

    r37980778c78--54eacbcbf0cd0501686637e6e9c60599

    (reprounzip-vistrails didn't change) Bugfixes: Correctly show an error message if ptrace is unavailable Make Docker & Vagrant setup much faster Enhancements: Add...
  • software

    r37980778c78--01c17f4939fc7a6c992416f6ef44453b

    Overview The swift project management site is now live and ready for use at https://swift-pm.herokuapp.com/. New Features Conda Support Admin Access for GCRF African SWIFT...
  • software

    OpenMC 0.6.1

    New Features Coarse mesh finite difference (CMFD) acceleration no longer requires PETSc Statepoint file numbering is now zero-padded Python scripts now compatible with...
  • software

    r37980778c78--55b9c1afa833f1a094326e6812fe6760

    codebook 0.7.4 Additions Function new_codebook_rmd creates a new file in your working directory with a codebook template. Function metadata can be used to set dataset-level...
  • software

    SAMRI — Small Animal Magnetic Resonance Imaging

    SAMRI (Small Animal Magnetic Resonance Imaging) - pronounced "Sam-rye" - provides fMRI preprocessing, metadata parsing, and data analysis functions and pipelines....
  • software

    r37980778c78--6ef4046a680a2c1048890727a3769f23

    "Blaster" is a Microsoft Windows-based sequence processing and analysis tool that provides simple and intuitive graphical user interface to some of the most common tools for...
  • software

    MitoA analysis tool for Linux

    The MitoA analyser is an easy-to-use GUI-based morphological quantification tool that enables biologists to analyse and compare different samples of segmented mitochondria...
  • software

    r37980778c78--c0434c355f0ead710254c5af93d0f211

    CryptoManana version 0.4.0: Added keyed hash algorithm objects based on HMAC for MD5, SHA-1, SHA-2 (familiy), SHA-3 (family) and Whirlpool algorithms; Added salting...
  • software

    r37980778c78--c8f7a250fe3d328cbd97214a09e6eecc

    Added Suggestions from JOSS reviewers. Dockerfile for alternative installation. Changed README with latest version of packages tested. Support for CUDA 8.0 using gcc...
  • software

    iLCSoft/ConformalTracking: v01-10

    v01-10 2019-10-08 Remi Ete (PR#55) ConformalTracking processor: Use streamlog macros instead of raw calls 2019-09-09 Andre Sailer (PR#54) Add Parameter TooManyTracks to...
  • software

    r37980778c78--a9c481c4cecfcd17df0427481fcb6f3d

    [FIX] Adopt new FreeSurfer (v6.0.1) license mechanism (#787) [ENH] Output affine transforms from original T1w images to preprocessed anatomical (#726) [FIX] Correct headers in...
  • software

    r37980778c78--e3817c00be99f0ab19dd1e7358fa6a67

    v01-09 2019-08-22 Erica Brondolin (PR#53) Include cut in slope in z for CA building part to reduce number of combinatorics In ConformalTrackingV2: configurable via per step...
  • software

    Software used in 'Testing'

    This records collates DOIs for the software components used in 'Testing'. The Firedrake components and dependencies used were: COFFEE (A Compiler for Fast Expression...
  • software

    ReproZip: 1.0.5

    (reprounzip-vagrant didn't change) Bugfixes: Correctly download parameters from server More reliable way of determining X server IP without using /bin/ip Downloads:...
  • software

    r37980778c78--e8bc2a667081fcc4737162dad5500745

    reprounzip-vistrails didn't change) Bugfixes: Fixes error using Docker with--enable-x11 on Python 3 Enhancements: docker run gets a --detach command, to keep the...
  • software

    r37980778c78--1e88594c4086dd7e54ff3079b42e6cc2

    Behavior changes: reprounzip will no longer run on Python 2.6 Bugfixes: Fixes file download not using cache if URL is HTTPS Fixes unpacking with directory or chroot for...
  • software

    Mochimodel: Mdsplus Tree For Mochilab & Mochi.Labjet

    MochiModel This python script generates a hierarchical MDSplus model tree which interfaces with the Mochi LabJet MochiControl LabVIEW software. MochiControl stores all...
  • software

    UMCUGenetics/IAP: v2.5.0

    New features: IAP modules in own namespace Initial implementation of bcftools roh Sync IAP with Harwtig Pipeline v1.10 and v1.11 Add VT normalize to freebayes analysis...