101 items found

Types: software Tags: 19999 Mathematical Sciences not elsewhere classified 69999 Biological Sciences not elsewhere classified Genetics

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  • software

    r37980778c78--83eeb9e883cdde064a3a12cf066cb233

    This repository contains codes for grey-box identification of nonlinear dynamical systems using TensorFlow and Keras. The core components are a set of custom Keras layers. The...
  • software

    psu-inversion/atmospheric-inverse-methods-for-flux-optimization: Initial pape...

    Codebase at the time of the initial submission of the first paper. This should be complete, but there may need to be a last few tweaks before the code and paper are ready.
  • software

    r37980778c78--35b6420c5aa6a2709671b953e6084820

    This data visualization project explores flight Issues and popular airlines. Flight Issues: Delay and Safety and Popular Airlines: Revenue and Passenger counts are visualized...
  • software

    An Agent-Based Simulation of the Stolper-Samuelson Effect

    This is the source code of the model described in the paper "An Agent-Based Simulation of the Stolper-Samuelson Effect", which was published in the journal Computational...
  • software

    Arcticcritter

    Arcticcritter is a prototype webbased data exploration and retrieval tool build to showcase visualization techniques and to enable user-driver demand analysis for...
  • software

    PathfinderTURB for CHM15K ceilometers

    The PathfinderTURB algorithm is coded in MATLAB and requires a certain number of toolboxes. The version of PathfinderTURB available here is for any type of CHM15K, if someone...
  • software

    r37980778c78--df6f4c2d732393e7174268128a30e75f

    magicCalling v0.0.2 magicCalling is an R package for converting raw marker data into marker alleles. It implements two novel methods.  The first is a model-based clustering...
  • software

    blastn

    Nucleotide-Nucleotide BLAST 2.7.1+
  • software

    The Design and Implementation of the Wolfram Language Compiler

    Benchmark source code for the CGO'20 paper
  • software

    Decidable Subtyping for Path Dependent Types - Artifact

    A proof of subtype decidability for the Wyvself and Wyvfix variants of Wyvern, formalised in Coq. The associated type systems are described in greater detail in the associated...
  • software

    greenelab/continuous_analysis: Continuous Analysis v1.0

    This release is associated with the in press version of the continuous analysis manuscript.
  • software

    phenoCDM: Continuous Development Models for Incremental Time-Series Analysis

    Using the Bayesian state-space approach, we developed a continuous development model to quantify dynamic incremental changes in the response variable. While the model was...
  • software

    r37980778c78--f87cef31625ee585e091d18b6412e37e

    This is the source code for our paper "Detecting Almost Symmetries of Graphs."
  • software

    r37980778c78--076c89672b380a6d979f84e5f9d6fd63

    This is the initial packaging of the scripts and data sources used to generate the default emissions inventory for MARC; these are intended as supplements or modifications to...
  • software

    r37980778c78--eea7fae69e0cfe48e9152086874ce993

    Infectious Disease Model that simulates the dynamics of the variables associated with the model
  • software

    R scripts for "Noise model estimation with application to gene expression"

    R - scripts for the paper: Zhornikova P., Golyandina N., Spirov A. "Noise model estimation with application to gene expression"
  • software

    nathanyu835/brainhacks: Initial Release

    Initialization of project for BrainHacks 2017!
  • software

    R scripts for "Noise model detection for 1D and 2D data with application to g...

    R - scripts for the paper: Zhornikova P., Golyandina N., Spirov A. "Noise model detection for 1D and 2D data with application to gene expression"  
  • software

    r37980778c78--ca9e036843d05089ecfa3bed73081c77

    MATLAB script for example in 2018 paper: A mathematical model for elasticity using calculus on discrete manifolds
  • software

    r37980778c78--b52150cc1c4968d15b47f8803fa3d93f

    epiTOC2.R is an R-script that aims to estimate the mitotic age of a sample profiled genome-wide at the DNA methylation level. It is based on a mitotic clock model where DNA...