82 items found

Organisations: RISIS2OpenData Tags: Evolutionary Biology Holocene Inorganic Chemistry Molecular Biology

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  • dataset

    Puckett et al-Samples_w_mtDNA_Haplotype_List

    File includes the list of samples and the mitochondrial haplotype sequenced from each sample. List also includes study area where sample was taken. See Fasta file with...
  • dataset

    Sample metadata

    Microbiome sample metadata. "SampleID" = unique identifier for a sequenced 16S rDNA amplicon pool corresponding to a single sample. "Name" = more descriptive unique sample name....
  • dataset

    2654eratoPHASED

    DNA sequence data for a Proteasome 54kD subunit protein-coding sequence (referred to as 2654 in the manuscript) for multiple individuals for multiple races of Heliconius erato....
  • dataset

    Results of principal component analysis.

    Loadings, eigenvalues and cumulative amount of variation explained by four of the components (PC's) obtained from a PCA analysis using the log-transformed volume or the relative...
  • dataset

    GPCReratoPHASED

    DNA sequence data for a partial protein-coding sequence of the gene G protein coupled receptor for multiple individuals for multiple races of Heliconius erato. The data is...
  • dataset

    dedup_wf_001--99f22125168cfa8739ccf0c8f314a5d7

    DNA sequence data for a partial protein-coding sequence of the gene bves for multiple individuals for multiple races of Heliconius melpomene. The data is derived from direct...
  • dataset

    PPC_correction.tar.gz

    This archive (700MB) contains the following data files for Pritchard et al. (2016), used for calculating and applying the PPC correction: R_code for_PPC_correction.txt:...
  • dataset

    VCF file for all individuals and SNPs included in the study.

    This is a VCF file generated using the GATK Unified Genotyper, then filtered as describe in the paper. The PL field provides the phred-scaled and normalized genotype...
  • dataset

    nonAdmix_nacanids_94indiv_unrel_noYNP_42Ksnps_wEcotypes.tfam

    The corresponding TFAM file for the set of 94 unrelated individuals showing >50% assignment in structure. The first column of each line is the ecotype designation for each...
  • dataset

    Scientific-and-common-names-of-trawl-species

    Scientific names, common names, and species ID codes from the Northeast Fisheries Science Center's biannual bottom trawl survey, provided by M. Fogarty and S. Lucey. See README...
  • dataset

    Full Data-Set

    Full dataset used in the analyses column #1: total mass of focal seeds (of paternal genotype i) on a given ear column #2: number of focal seeds (of paternal genotype i) on a...
  • dataset

    data_for dryad

    The attending spreadsheet contains data from all 3 levels of diversity and 2 group sizes. Data were collected by JBS, ETA, JG, MH, and NM. The “diversity” column refers to the...
  • dataset

    Licona-Vera et al_morphology_info

    Seven body measurements from each of 122 hummingbirds (males and females) used in morphological analyses.
  • dataset

    Suz12melpomenePHASED

    DNA sequence data for the gene Su(z)12 for multiple individuals for multiple races of Heliconius melpomene. The data is derived from direct sequencing, inferring polymorphisms...
  • dataset

    Supplementary Table 1

    Commensal rodent species are key reservoirs for Toxoplasma gondii in the domestic environment. In rodents, different T. gondii strains show variable patterns of virulence...
  • dataset

    Delivery standardized

    Standardized and pruned data used in formal analyses presented in the publication. MS Excel was used to create the file. See read me file for additional details.
  • dataset

    Supplementary Information

    Supplementary Information for: Early Succession on Slag Compared to Urban Soil: A Slower RecoveryS1 File. Supplemental information: methods and results. Detailed history of...
  • dataset

    dedup_wf_001--0a2369efaca8efaafea6ec9be423dca8

    DNA sequence data for the gene kinesin for multiple individuals for multiple races of Heliconius melpomene. The data is derived from direct sequencing, inferring polymorphisms...
  • dataset

    20120318_Allozyme_data

    Please see the ReadMe file. The file 20120318_Allozyme_data conatins the allozyme data for this manuscript in text format. Archival locations for other data are described in the...
  • dataset

    Input data files for R/qtl including genotypes and phenotypes

    Input data files for R/qtl including genotypes and phenotypes.