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dedup_wf_001--85099dce579aa48a2788f406a6296ae6
Genotypes of the fish sampled: ID(A:fry ; P:anadromous)type(fry/anadromous); sex of the anadromous fish; father and mother assigned to each fry. " * " corresponds to precocious... -
AccessionsList-R.antirrhini.xlsx
the list of samples analyses in the paper with relevant accession codes -
Genotype data
The TalentiEtAl_2017.ped file contains the unphased genotype data for all the 929 animals described in the paper: "Genomic analysis suggests KITLG is responsible for a roan... -
Morphometric data
This table contains morphometric measurements in millimeters of the four focal taxa. Measurements are: length of innermost retrices, wing chord, culmen length, and tarsus... -
1625Adult genotypes by year01-10
Adult data captured in 10 years (2001-2010). Each year data include passive integrated transponder (PIT) tags, annual adult ID, sampling date, and genotypes based on 12... -
Data set information.
A file containing the Genbank accessions and popset for each re-analysed data set. -
data_trait_eggsize
Table that contains egg size phenotypes of egg laying females (5 columns). Ind_ID: identifier of the individual (the egg laying female); EggVolume: egg volume calculated from... -
Tree Files
-Astral_Bootstrap.tre newick formatted 100 bootstrap replicates from the COMPLETE ASTRAL-II species analysis -Gene_Trees_Full.tre newick formatted 498 "best" gene trees from... -
RatDemographics-STRUCTUREPL8sep
Genotype data from 146 trapped individuals formatted for STRUCTURE, with animals grouped by sampling site with Pau da Lima site 8 separated by sampling year (clustering analyses... -
RatDemographics-ARLEQUIN-PL8sep
Genotype data from 146 trapped individuals formatted for Arlequin, with animals grouped by sampling site with Pau da Lima site 8 separated by sampling year (clustering analyses... -
Carcharhinus melanopterus - Dloop Sequence Data
Dloop Sequence Data of all individual used in the paper -
perl script to run quantiNEMO simulations
This is a wrapper script that I wrote to run quantiNEMO to generate the simulated data files that were analyzed in the paper. -
ABC rejection data - X chromosome
A Matlab file containing the Approximate Bayesian Computation rejection matrix (X chromosome). -
RGSM_dRYAD
Microsatellite data for Rio Grande silvery minnow. Data file created in Excel with Microsatellite toolkit. -
Simulated Data
################################################## Introduction ################################################## The data was simulated with ms (Hudson, Bioinformatics,... -
morphological data
We assessed the morphological differences between 328 adult specimens from the R3 and R. tanezumi mt lineages. Five linear measurements were considered: head + body length, tail... -
dedup_wf_001--1e592d1981c6030be8bf9a04c73f767f
Genotype data from 146 trapped individuals formatted for Genepop, with animals grouped by sampling site with Pau da Lima site 8 separated by sampling year (clustering analyses... -
RatDemographics-GENECLASS-PL8sep
Genotype data from 146 trapped individuals formatted for Geneclass, with animals grouped by sampling site with Pau da Lima site 8 separated by sampling year (clustering analyses... -
Parr sampling data
This is field-recorded data of the sex, maturity and measurements of 100 parr. Some parr were too small and could not be sexed in the field. Sampling occurred via electrofishing...
