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MEC-15-690-Dryad
This zip file extracts data used in Roy et al MEC-15-0690. The ".txt" file is the raw microsatellite scores in number of repeats formatted for the Convert.exe program. The... -
MOESM2 of Bioinformatics studies of Influenza A hemagglutinin sequence data i...
Additional file 2. Complete sequence data of the hemagglutinins identified as leading to recombination-like events listed in Additional file 1 and Table 3 are included as text... -
remove_header script
This python script removes the header row from each csv file that is listed in column 1 of an input csv file. -
Supplemental Data 1
Phylogenetic dataset (TNT) used in the study. The TNT file can be converted to .nex from the ‘export (nexus format)’ function in TNT, or alternatively can be opened by ‘open... -
dedup_wf_001--7b0860e910c7df6b7ffd808223b159d7
This zip folder contains all flight trial data files. There is a separate file for each flight trial. Each file has the necessary information to uniquely identify each bee,... -
dedup_wf_001--cb24e4a81eb28a631418c0eb87f154cc
Metadata file that includes column descriptions and associated data sources for all data in the final analysis file as processed by the Processing R script. -
Select and resequence data package
This zipped set of files includes all intermediate data sets and major scripts used to create the results and figures in the paper. See Readme file for additional info. -
Scripts associated with the bioinformatics pipeline
Scripts associated with the bioinformatics pipeline -
dedup_wf_001--8b1d0ac6e3be8061441dc1fed7366cb6
BEAST replicate run 1 files including xml file, log file, and trees. -
Taff_Data_ReadMe
Text file describing the contents of the data package and the meaning of column headers for the data files. -
CP13_SS_analysis
Matlab script to create Figure 2 in Morris et al. The script calls upon the data in the file TAS_SS_16_11_11.csv. To run, change the file path to lead to the location of this... -
Ponce_et_al_2014_taxa_list
Microsoft excel file that lists species names and the sample ID's used in nexus files -
processed_reads6
File 6/13 containing processed reads after running process radtags. Contains separate .fq files for each sample. -
STRUCTURE Data File for all A. spinosa populations
This is the project file for the STRUCTURE analyses covering all A. spinosa populations. The .spj file containing the run parameters are contained in a separate file.
