-
TLR1LA_All_genotypes2015
This is the output file with Phase results for TLR1LA in Berthelot's pipits. This is a fasta file but should be opened using a text editor such as Notepad -
dedup_wf_001--01488b983f5230a7efe236bfb3b5b746
Genetic data (G) and environmental data (E) infiles that were analyzed in this manuscript. These data sets were simulated in R according to the Wright-Fisher model with... -
Estimate pairwise FST script
A script to estimate the population pairwise FST. Inputs genotypes as a Matlab file and exports FST values as another Matlab file. -
Pairwise FST estimates for the X chromosome SNPs
A Matlab file containing 867049 X chromosome SNPs, their pairwise FST estimates, and P-values for each SNP derived from coalescent simulations. -
dedup_wf_001--495169c0b1b868a870778992844b4c8b
FASTA file. DNA sequences of MHC class II alleles which have been validated as true alleles according to criteria described in the paper, but have been detected only in a single... -
SF2 input files
Frequencies of European human SNPs and fixed differences (x=n) to chimpanzee that was used as input file for SweepFinder2. Original data from: Drmanac R, Sparks AB, Callow MJ et... -
Contig sequences for P. leucopus transcriptome (fasta file)
Transcriptome contigs assembled from raw SOLiD 5500 xl sequencing reads using Trinity. Only contigs with high-quality open reading frames identified from Transdecoder and... -
TLR21_All_genotypes2015
This is the output file with Phase results for TLR21 in Berthelot's pipits. This is a fasta file but should be opened using a text editor such as Notepad -
dedup_wf_001--e887bd39751fec49e0a5ff1ebe388da1
A file describing the headers and contents of the other uploaded files
