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Data, analysis scripts, and results
This is the main working directory for the project and it contains clean data, all scripts needed to reproduce the analysis, results, figures, notes from the development... -
FISH experiments for line N02Y5109
Zip file containing individual tif files of blue (DAPI) green (FITC) and red (Alexa594) fluorescence taken on Zeiss or Nikon epifluorescence microscope. File name give Slide... -
dedup_wf_001--85d4d1d23533098f3bb15e5c37dcdac5
Updated R analysis file (MusselTracker_workup.Rnw) and accompanying data files for the MusselTracker project. See the README.md file for information on the files contained with.... -
Underlying data to PLOS ONE
The data file is in SPSS format (.dat file). It contains all data used for analyses in the manuscript, in addition to explanations of the different data fields and coding, all... -
FISH experiments for line KS95H102
Zip file containing individual tif files of blue (DAPI) green (FITC) and red (Alexa594) fluorescence taken on Zeiss or Nikon epifluorescence microscope. File name give Slide... -
Ambystoma_Genetic Data
Compressed file consisting of separate R input files for Ambystoma texanum and unisexual Ambystoma. The data for each group is included as txt input files associated with the... -
dedup_wf_001--965e8be9bd41c08528741d030583598a
A zip file containing two data files plus a third text file containing descriptions of the data files. See file "File annotations.txt" included int the archive for more... -
duque_stevens
This zip file includes data files, an R script, and a README file to analyze pinyon jay food sharing data. -
Data_Mueller_et_al._2018
This Zip archive includes two csv-files. These files provide all data used for the analyses included in the research article. -
dedup_wf_001--2216a7c17adb929d62dc741c6ed299e0
The Nexus format file for the Bayesian inference analysis -
FISH experiments for line N02Y5075
Zip file containing individual tif files of blue (DAPI) green (FITC) and red (Alexa594) fluorescence taken on Zeiss or Nikon epifluorscence microscope. File name give Slide code... -
dedup_wf_001--7f35bf10b8772c330424c78c7ad0986e
A RAR file containing seven files: (1) three .txt files with processed data to be used in the statistical analysis, (2) one .xls file containing raw data, (3) one editable .Rnw... -
C_nidiformis_polygon_file
Google Earth modified polygon file. Place in same directory as analysis and species trees file, and make sure they are referenced correctly in the xml file. -
SAGUARO input file
The feature file required for SAGUARO analysis consisting of information on SNPs from 43 pupfishes. This file was converted into this format from a vcf file. -
FISH experiments for line N02Y5105
Zip file containing individual tif files of blue (DAPI) green (FITC) and red (Alexa594) fluorescence taken on Zeiss or Nikon epifluorescence microscope. File name give Slide... -
ANIMAL_ID coding in capture file
Details of coding used in SPACECAP input files. In input files ANIMAL_IDs must be represented as sequential numbers. This file shows which ANIMAL_IDs correspond to which...
