58 items found

Organisations: RISIS2OpenData Tags: 110309 Infectious Diseases 69999 Biological Sciences not elsewhere classified Cancer Groups: figshare Types: software

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  • software

    QC script for removing adaptors

    This script was used for removing portions of the Illumina reads that were not needed.
  • software

    r37980778c78--6afc3ce27947b5f1576285282ee6e270

    This software bundle contains everything needed to reproduce the experiments of the paper. In particular, all files with "previous-vs-optimized-implementation" in their name...
  • software

    r37980778c78--c6eb0058faccdaf5382353538bf5ea2e

    An implementation of the Multi-PCSF algorithm described in http://dx.doi.org/10.1142/9789814583220_0005  This is the initial public release under the BSD-2-Clause license....
  • software

    Colour 0.3.8

    Colour Science for Python Colour is a Python colour science package implementing a comprehensive number of colour theory transformations and algorithms. It is...
  • software

    r37980778c78--a725b01d57491618d95715700b951081

    First official release of gHSS, a software that implements algorithms for the incremental greedy approximation to the Hypervolume Subset Selection Problem (HSSP) in two and...
  • software

    bigSCale2

    Framework for clustering, phenotyping, pseudotiming and inferring gene regulatory networks from single cell data.
  • software

    wiqr R package: a SPARQL client for Wikidata Query Service

    wiqr is a small R package containing simple SPARQL client for Wikidata Query Service.   Installation You can install the latest development version...
  • software

    filter_fasta.py

    Usage: ./filter_fasta.py [path to input dir] [path to accepted taxon list]. Input files are expected to be in fasta format. The script will traverse all files in the input dir,...
  • software

    r37980778c78--a3d356232a48b9dea10b29c7bef0c2a2

    This is the first release of CRes and contains: source code and documentation for CRes high-resolution .pdf files for figures from Watson et al. (2019) JVGR article script...
  • software

    r37980778c78--19a242c28195ff2ba18d8edc414b3fda

    Inner region programs for the reengineered UK computational implementation of the R-matrix method for the treatment of electron and positron scattering from molecules (BTO/GTO...
  • software

    Picongpu 0.1.2: Bug Fixes

    This is version 0.1.2 of PIConGPU, a pre-beta version and pure bug fix release. It contains selected backports of critical issues in PIConGPU. Two major bugs that have been...
  • software

    r37980778c78--f1ec723364e155ee9b086cbe4ac46d12

    The CernVM-File System (CernVM-FS) provides a scalable, reliable and low-maintenance software distribution service. It was developed to assist scientific collaborations to...
  • software

    Data and outputs for Selene manuscript case 2

    Case 2: Developing a new architecture and comparing performance across architectures. chromatin_profiles: ENCODE and Roadmap Epigenomics profiles used in DeepSEA (Zhou &...
  • software

    The CernVM File System: v2.5.1

    The CernVM-File System (CernVM-FS) provides a scalable, reliable and low-maintenance software distribution service. It was developed to assist scientific collaborations to...
  • software

    Software for Control of Autonomous Robots Using Fuzzy Logic Controllers Tuned...

    Software for Control of Autonomous Robots Using Fuzzy Logic Controllers Tuned by Genetic Algorithms This software implements the autonomous control of a robot by using a fuzzy...
  • software

    r37980778c78--eea7fae69e0cfe48e9152086874ce993

    Infectious Disease Model that simulates the dynamics of the variables associated with the model
  • software

    Ocean model of Protactinium, Thorium and Particles (ProThorP)

    ProThorP [pɹoθɔrp] is a model of thorium, protactinium and particles.  More specifically, at the moment, it is a conceptual model that describes, and a numerical model that...
  • software

    Computational files for publication "Destabilizing evolutionary and eco-evolu...

    Maple, Matlab, and R computational files for all analysis in "Destabilizing evolutionary and eco-evolutionary feedbacks drive eco-evo cycles in empirical systems" by...
  • software

    r37980778c78--6a309a555b2a6d94323f6289ad496230

    Spreadsheets (.xlsx format) that generate (1) textual specimen descriptions, (2) summaries of measurement variations and (3) lists of examined specimens with collection data....
  • software

    Geoffbarrett/Batchtintv2: Batchtintv2

    BatchTINTV2 is A GUI created by the Taub Institute in order to create an end-user friendly batch processing solution to complement Axona's new command line modification of TINT.