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Software used in 'Discontinuous Galerkin discretization for two-equation turb...
This record collates DOIs for the software components used in 'Discontinuous Galerkin discretization for two-equation turbulence closure model'. The Firedrake components and... -
r37980778c78--8d6f5f8e6b980bd90951cf8b2e8ead3a
Tool for the determination of simultaneity factors in PEV charging processes -
r37980778c78--a7007b3b8857f74a7474f892a71f9acf
This record collates DOIs for the software components used in 'Code generation for generally mapped finite elements'. The Firedrake components and dependencies used were:... -
Poly-(3-hexylthiophene) Model and Code for Molecular Dynamic Simulations
Here we present files necessary for simulating our united-atom poly-(3-hexylthiophene) model in molecular dynamics. The input file "P3HT_Blends.py" acts a wrapper... -
r37980778c78--f5062bf6ac5079c39371b42fa4dcaf47
GenerateAG.m is a short MATLAB script that calculates a restricted generalized inverse AG using input data from an atmospheric photochemistry mechanism. The inverse problem... -
r37980778c78--99fb8ade83011b2e6853edcf9d5dd77d
KNIME nodes for KripoDB (https://github.com/3D-e-Chem/kripodb). KripoDB is a Python package used to interact with Kripo fragment, fingerprint and similarity data files. KRIPO... -
filter_fasta.py
Usage: ./filter_fasta.py [path to input dir] [path to accepted taxon list]. Input files are expected to be in fasta format. The script will traverse all files in the input dir,... -
SI for "A Computational Study of Structural and Excitonic Properties of Chlor...
files in chapter * are stored in chapter_* folders note for CTubeGen software in chapter_5 folder A software I developed for generating arbitrary chlorosomal tubes,... -
r37980778c78--97d0a52e5b396c15f61aff3030b1e46e
Includes compiled standalone apps for Apple Mac OSX (BeamformingAlgComp_Listen_v1_MAC.zip) and Windows (BeamformingAlgComp_Listen_v1_WIN.zip). Just extract the file and run the... -
r37980778c78--5a1b5d558e17bd91875c69985a2f8a60
Bioinformatics Lab, Dept. of Biotechnology, Heritage Institute of Technology, Kolkata, India Summary Working with trajectories generated with Desmond and GROMACS molecular... -
MitoS segmentation tool (GPU) for Linux
The MitoS segmentation tool (GPU) is an easy-to-use GUI-based segmentation tool that enables biologists to use the pretrained deep learning model MitoSegNet to segment... -
r37980778c78--a94d60b479819dfd5ce86a9ad943b532
Marine GIS database in Hong Kong This is the graduation project under the Master Program -- Environmental Management (MSc EnvMan) in The University of Hong Kong. The Swire... -
Software used in 'PCPATCH: software for the topological construction of multi...
This record collates DOIs for the software components used in 'PCPATCH: software for the topological construction of multigrid relaxation methods'. The Firedrake components... -
Mntabassm/Saen-Lars: Zenodo
Package Repository | SAEN-LARS Version: 1.0.0 Title: Sequential Adaptive Elastic Net Approach for Single-snapshot Source Localization Short... -
jamesrhester/PyFormatTransformer 0.9
This software is described in Hester, J.R. (2016) ""A Robust, Format-Agnostic Scientific Data Transfer Framework" The Data Science Journal 15:12,... -
RFixer: a tool for repairing complex regular expressions using examples
This artifact contains the virtual machine image that has RFixer installed. RFixer is a tool for repairing complex regular expressions using examples. Given an incorrect... -
r37980778c78--2d0cf5363e798e0b723a4b88be3d38a6
This record collates DOIs for the software components used in 'Code generation for generally mapped finite elements'. The Firedrake components and dependencies used were:... -
r37980778c78--c7cfdab65444d59b53454df4dad08fa9
This simplified photochemistry mechanism contains the essential reactions related to ozone formation: NOx chemistry, VOC chemistry, formation of a peroxy radical from VOC... -
r37980778c78--2e229fe78b1d8b2a86e2439cd68bf951
This record collates DOIs for the software components used in 'Firedrake Springerbrief'. The Firedrake components and dependencies used were: COFFEE (A Compiler for Fast... -
Aurora Galaxy Tools: Using R Markdown as a framework for Galaxy tool development
While many biologists are able to run sophisticated bioinformatic analysis using Galaxy, it is not always clear how well they understand the role of each tool in a workflow or...
