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Singularity 2.5.2 - Linux application and environment containers for science
Containers are proving to be an extremely valuable technology for science; Singularity focuses container approaches, workflows, and methods to create portable environments... -
csadorf/signac: v0.6.2
The signac framework aids in the management of large and heterogeneous data spaces. It provides a simple and robust data model to create a well-defined indexable storage layout... -
Exploring and Comparing Unsupervised Machine Learning Clustering Algorithms
The software includes code in the R language for two original Shiny apps for directly comparing two prominent unsupervised machine learning clustering techniques: k-means and... -
digicademy/xtriples: 1.4.0
A generic webservice to extract RDF statements from XML resources – https://xtriples.lod.academy (Release 1.4.0). -
bigSCale2
Framework for clustering, phenotyping, pseudotiming and inferring gene regulatory networks from single cell data. -
Cylineup
CyLineUp is a Cytoscape plugin that lets you import gene expression data and creates a ‘small multiples’ visualization from it. -
COHESIVE Information System (CIS) Virtual Machine
Project JIP2 COHESIVE COHESIVE: One Health Structure In Europe Virtual Machine of CIS (Cohesive Information System) related to the Deliverable D-4.1.1 Implemented... -
A general proof certification framework for modal logic - Implementation
This archive contains the lambda-prolog implementation of a general proof certification framework for modal logic -
Parameter Calculator
The software "Parameter Calculation" serves as a demonstration for calculating parameters as part of my bachelor thesis "Learning Analytics in Flipped Classroom -... -
Matlab code and simulated data for paper ""Distributed Zeroth Order Optimizat...
This is a Matlab code and simulated matlab data for paper “Distributed Zeroth Order Optimization Over Random Networks: A Kiefer-Wolfowitz Stochastic Approximation... -
psu-inversion/atmospheric-inverse-methods-for-flux-optimization: Initial pape...
Codebase at the time of the initial submission of the first paper. This should be complete, but there may need to be a last few tweaks before the code and paper are ready. -
An Agent-Based Simulation of the Stolper-Samuelson Effect
This is the source code of the model described in the paper "An Agent-Based Simulation of the Stolper-Samuelson Effect", which was published in the journal Computational... -
Arcticcritter
Arcticcritter is a prototype webbased data exploration and retrieval tool build to showcase visualization techniques and to enable user-driver demand analysis for... -
PathfinderTURB for CHM15K ceilometers
The PathfinderTURB algorithm is coded in MATLAB and requires a certain number of toolboxes. The version of PathfinderTURB available here is for any type of CHM15K, if someone... -
The Design and Implementation of the Wolfram Language Compiler
Benchmark source code for the CGO'20 paper -
Decidable Subtyping for Path Dependent Types - Artifact
A proof of subtype decidability for the Wyvself and Wyvfix variants of Wyvern, formalised in Coq. The associated type systems are described in greater detail in the associated... -
greenelab/continuous_analysis: Continuous Analysis v1.0
This release is associated with the in press version of the continuous analysis manuscript. -
phenoCDM: Continuous Development Models for Incremental Time-Series Analysis
Using the Bayesian state-space approach, we developed a continuous development model to quantify dynamic incremental changes in the response variable. While the model was... -
R scripts for "Noise model estimation with application to gene expression"
R - scripts for the paper: Zhornikova P., Golyandina N., Spirov A. "Noise model estimation with application to gene expression"
