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filter_fasta.py
Usage: ./filter_fasta.py [path to input dir] [path to accepted taxon list]. Input files are expected to be in fasta format. The script will traverse all files in the input dir,... -
amPy30
Python script used to pre-process raw sequencing reads. Calls on three data files: 2 raw sequencing read files in FastA format ("X.TCA.454Reads.fna"), and "barcodeIDs.txt" -
Supplementary File 2
This is a Python 3.5 script of the ODE model described in Sanguanini and Cattaneo 2018. This file evaluates the resting-state output of the model for multiple values of...