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Landscape of gene fusions in epithelial cancers: seq and ye shall find
Abstract Enabled by high-throughput sequencing approaches, epithelial cancers across a range of tissue types are seen to harbor gene fusions as integral to their landscape of... -
Study dataset.
Compliance with NPG checklist items: data dictionary available in project space. In version 2, 7 errors from the previous version at database lock (publication date for PMID... -
Kras_10-5_132136_filtered.csv
A gzipped csv documenting the tag, read sequence, and associated qualities of all reads matching the majority read length (documented in read lengths csv) of PCR-based 10^-5... -
mtDNA alignment
Mitochondrial (COI) alignment of Parasemia plantains used in the paper "Temporal relationship between genetic and warning signal variation in the aposematic wood tiger moth... -
Supplementary Data: "Challenges In Automated High-Throughput Ab Initio Thermo...
These supplementary data contain input and output files of EMTO density-functional theory (DFT) calculations and IPython/Jupyter notebooks that were used in analyzing the... -
Spatial distribution of random velocity inhomogeneities in the southern Aegea...
This dataset contains supplementary files uploaded as part of the above journal article. 5 sub-datasets have been uploaded separately. The first sub-dataset contains the peak... -
VCF file containing imputed genotype data belonging to 67 newly sequenced and...
VCF file containing imputed genotype data belonging to 67 newly sequenced and publicly available ancient samples which we analysed in Martiniano et al. (2017). -
CIViCmine
This describes the output files for the CIViCmine project. These files are loaded directly by the CIViCmine viewer. The code for this viewer is available in the CIViCmine Github... -
Available data
Assembled EST-SSR sequences, single-copy gene sequences and 3,126 gene sequences with Ka value, Ks value and Ka/Ks ratio. The files (alignment file,tree file,script file) for... -
survival_data
We measured larval mortality for S. droebachiensis at 3 different temperatures (3, 10 and 21 °C) reared in 4-l culture jars (n = 3). Temperatures in the jars were maintained... -
CIViCmine
This describes the output files for the CIViCmine project. These files are loaded directly by the CIViCmine viewer. The code for this viewer is available in the CIViCmine Github... -
dedup_wf_001--cb24e4a81eb28a631418c0eb87f154cc
Metadata file that includes column descriptions and associated data sources for all data in the final analysis file as processed by the Processing R script. -
VCF, pileup, and other files for Betula analyses using ebg & GATK
These are the VCF, pileup, and input files files produced by the Genome Analysis ToolKit, SAMtools, and our own scripts, respectively, used for comparing the genotypes estimated... -
CIViCmine
This describes the output files for the CIViCmine project. These files are loaded directly by the CIViCmine viewer. The code for this viewer is available in the CIViCmine Github... -
Additional file 2: of Distinguishing potential bacteria-tumor associations fr...
This file is a tab-delimited text file of all TCGA read pairs and their corresponding metadata and bacterial taxonomic assignments. Comments are denoted by a #. Abbreviations... -
Raw data for Phsp-16.2::gfp gene expression in different genetic backgrounds
Excel file containing the results of nine individual experiments. Each dataset lists the values for gene expression level of Phsp-16.2::gfp measured in arbitrary photomultiplier... -
Data Summary
Summary of thirty game structures that compose the full combined data set [6–13]. BR 2006 [8] and DB 2005 [7] both also conducted one-shot games; we only describe and use their... -
Additional file 4: of GGDonto ontology as a knowledge-base for genetic diseas...
Schema of “GDGDB RDF” (available at: http://jcggdb.jp/rdf/diseases/gdgdb-schema ). (RDF 12 kb) -
Genotype data
The TalentiEtAl_2017.ped file contains the unphased genotype data for all the 929 animals described in the paper: "Genomic analysis suggests KITLG is responsible for a roan...
