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Licenses: License Not Specified Tags: 69999 Biological Sciences not elsewhere classified Developmental Biology Genetics Science Policy Space Science Groups: Datacite Types: software

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  • software

    The Run Control Framework, Data, And Version Of Parflow Used In The Publicati...

    The tar ball containing the RCF, data, and version of ParFlow relevant to the publication: A run control framework to streamline profiling, porting, and tuning simulation...
  • software

    ogs5py v1.0.3

    Purpose ogs5py is A python-API for the OpenGeoSys 5 scientific modeling package. Installation You can install the latest version with the following command: pip install...
  • software

    FUImaging: Neuroimage2014 release v2 - more improvements

    This package supplements our recent paper on automatic image segmentation using Non-negative Matrix Factorisation (NMF) [1]. This release adds bugfixes and adapts the regNMF...
  • software

    Source Code For "A Comparative Study Of Endoderm Differentiation In Humans An...

    Source code for the publication, "A comparative study of endoderm differentiation in humans and chimpanzees". 
  • software

    Arcticcritter

    Arcticcritter is a prototype webbased data exploration and retrieval tool build to showcase visualization techniques and to enable user-driver demand analysis for...
  • software

    PathfinderTURB for CHM15K ceilometers

    The PathfinderTURB algorithm is coded in MATLAB and requires a certain number of toolboxes. The version of PathfinderTURB available here is for any type of CHM15K, if someone...
  • software

    TractSeg pretrained weights - endings_segmentation

    Pretrained weights for TractSeg for output type "endings_segmentation".
  • software

    KNIME Python wrapper

    Abstract Python wrapper KNIME node and helpers. Used for development of KNIME nodes calling Python scripts. Changed In tests call PythonWrapperTestUtils.init() instead of...
  • software

    MitoS segmentation tool (GPU) for Linux

    The MitoS segmentation tool (GPU) is an easy-to-use GUI-based segmentation tool that enables biologists to use the pretrained deep learning model MitoSegNet to segment...
  • software

    kwb.pkgbuild (v0.1.5): R Package for Standardised Development at KWB

    Helper functions for automating R package development at KWB to a predefined style. Documentation website: https://kwb-r.github.io/kwb.pkgbuild/   Changes in v0.1.2:...
  • software

    Aethalometer Data Processor

    Version 20200310   Data acquired from filter-based measurements such as Aethalomenter (AE31/AE30) needs carefully correction due to its inherent systemic error, i.e.,...
  • software

    ogs5py v1.0.2

    Purpose ogs5py is A python-API for the OpenGeoSys 5 scientific modeling package. Installation You can install the latest version with the following command: pip install...
  • software

    Worst-Case Analysis of Digital Control Loops with Uncertain Input/Output Timing

    Code and data for the publication "Worst-Case Analysis of Digital Control Loops with Uncertain Input/Output Timing" by M. Gaukler and P. Ulbrich at ARCH2019 (Workshop...
  • software

    github.com/denis-yuen/bcellmagic

    B cell repertoire analysis pipeline with immcantation framework. Usage: The typical command for running the pipeline is as follows: nextflow run...
  • software

    gap-packages/Semigroups: 3.0.2

    This is an minor release fixing some minor issues in the last release.  The following issues were resolved: Issue 330 InversesOfSemigroupElement some times returned an...
  • software

    Aurora Galaxy Tools: Using R Markdown as a framework for Galaxy tool development

    While many biologists are able to run sophisticated bioinformatic analysis using Galaxy, it is not always clear how well they understand the role of each tool in a workflow or...
  • software

    PNNL-PREMIS/PREMIS-ghg: Biogeosciences final version

    Release version cited in BG paper, https://doi.org/10.5194/bg-2019-218
  • software

    Supplemental Materials for "Entropy Rain: Dilution and Compression of Thermal...

    Enclosed is the source code used to run the simulations in the paper, "Entropy Rain: Dilution and Compression of Thermals in Stratified Domains," (Anders, Lecoanet,...
  • software

    ogs5py v1.0.4

    Purpose ogs5py is A python-API for the OpenGeoSys 5 scientific modeling package. Installation You can install the latest version with the following command: pip install...
  • software

    MitoS segmentation tool (GPU) for Windows

    The MitoS segmentation tool (GPU) is an easy-to-use GUI-based segmentation tool that enables biologists to use the pretrained deep learning model MitoSegNet to segment...