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File S2. PBW trees and output
File S2. This file contains the trees for all analyses of the PBW dataset, as well as the resulting PAUP* output. Individual files are described in the readme within the zip file. -
Full Data-Set
Full dataset used in the analyses column #1: total mass of focal seeds (of paternal genotype i) on a given ear column #2: number of focal seeds (of paternal genotype i) on a... -
Gene expression data
Typical example of the gene expression data obtained from microarray experiments. Each number represents the change (increase or decrease) of the gene expression level of the... -
Additional file 7: of A purely bioinformatic pipeline for the prediction of m...
Annotation tracks listing all predicted enhancers for genomic architecture in which an element search was performed. BED-formatted text files (.bed) annotating, at threshold... -
Data Analysis
This file contains all of the R code used in the analysis and to create the figures for this paper. -
CIViCmine
This describes the output files for the CIViCmine project. These files are loaded directly by the CIViCmine viewer. The code for this viewer is available in the CIViCmine Github... -
data_for dryad
The attending spreadsheet contains data from all 3 levels of diversity and 2 group sizes. Data were collected by JBS, ETA, JG, MH, and NM. The “diversity” column refers to the... -
Fly Tracking Arena Data
Arena data associated with the Fly Tracking data. Arena size is given in column A. Replicate number is given in column B. Arena center in pixels is given in columns C and D.... -
Additional file 3: Table S3. of Identification of cardiomyopathy associated c...
Summary of published data regarding miR-26a, miR-222 and miR-378-a5p. (DOC 126 kb) -
Phenotype File
This file contains skull and mandible shape principal component (PC) scores for each mouse. PC scores were normalized to mean 0 and std of 1. Mandible PC scores were calculated... -
BioWordlists
This describes the output files for the BioWordlists project. These files are ancillary data for other text mining projects. Each file is a tab-delimited file with one term per... -
Supplementary Table 1
Commensal rodent species are key reservoirs for Toxoplasma gondii in the domestic environment. In rodents, different T. gondii strains show variable patterns of virulence... -
merge_sort_enzymes_files
This perl script merges files listed in column 1 of an input csv file based on various columns within the files to be merged. For example, if chromosome number is found in... -
Supplementary File S2
Phylogenetic tree files in nexus format from concatenation and coalescent analyses of the entire dataset and subsets of the data matrix. -
Simulation parameters.
MBR = MPW = MCV = 100, MCA = WBA. n ∈ {3, 9, 27}, WBA ∈ [0.1, 2], WPC ∈ [0, 20], WCT = 0.1. ⌈n/2⌉ groups of size 1 and ⌊n/2⌋ of size chosen uniformly at random from [1, ⌊n/2⌋].... -
dedup_wf_001--a4c7ad7cfe80bb8cc581f08ee8dd6f18
Combination chemotherapy with 5-fluorouracil and dacarbazine in advanced medullary thyroid cancer, a possible alternative? -
Parameter estimates.
In model of multi-study gene-level influenza data: θ is the overall rate of genes involved with influenza; α represents false positive measurement errors, and β measures false... -
Assembly Statistics
‘all’ indicates assembly generated from the full HiSeq dataset; ‘rec’ indicates assembly generated from the recruited subset; Cov indicates the combined coverage of each segment...
