-
Selection experiment data
This file contains adult survival data and juvenile population counts during the course of the selection experiment described in the associated publication. The proportion of... -
dedup_wf_001--417836f8e8784abda81d93cfec196e64
Genotypes for European lines of A. thaliana (Chromosome 1) genotyped at a density of one SNP per kb. These data are used in our tutorial example 2 and supplementary file 2. Data... -
input_Bvalues
B-value map that was used as input file for SweepFinder2. Original data from: McVicker G, Gordon D, Davis C, Green P (2009) Widespread genomic signatures of natural selection in... -
Pairwise FST estimates for autosomal SNPs
A Matlab file containing 3663890 autosomal SNPs, their pairwise FST estimates, and P-values for each SNP derived from coalescent simulations. -
2497_indiv_phenotype
2497_indiv_phenotype.txt file. This file contains the phenotypes used in the analysis. Note that phenotypes are not available for all genotyped individuals. For more information... -
2497_indiv_5591_markers
The .ped file is a file of genotypes in plink style (see http://pngu.mgh.harvard.edu/~purcell/plink/). The column headings are: Family ID, Individual ID, Paternal ID, Maternal... -
Simulated Data
################################################## Introduction ################################################## The data was simulated with ms (Hudson, Bioinformatics,... -
Power analysis - simulations with sel. coeff. of 0.05
A Matlab file containing data related to the power analysis. Simulations of the evolution of a polygenic trait with the multilocus selection coefficient set at 0.1 (de Vladar... -
dedup_wf_001--01488b983f5230a7efe236bfb3b5b746
Genetic data (G) and environmental data (E) infiles that were analyzed in this manuscript. These data sets were simulated in R according to the Wright-Fisher model with... -
MetaPCA
Data file containing standard deviations of population means and latitudes from published common garden studies -
Estimate pairwise FST script
A script to estimate the population pairwise FST. Inputs genotypes as a Matlab file and exports FST values as another Matlab file. -
Microsatellite_data
Explanations for datafile "Microsatellite data.xls" This datafile contains microsatellite genotype information of Mastomys natalensis. General comment: "-9" describes a... -
Pairwise FST estimates for the X chromosome SNPs
A Matlab file containing 867049 X chromosome SNPs, their pairwise FST estimates, and P-values for each SNP derived from coalescent simulations. -
dedup_wf_001--36e553453ee21a77b526be278a586897
A Matlab file containing data related to the power analysis. Simulations of the evolution of a polygenic trait with the multilocus selection coefficient set at 0.1 (de Vladar... -
SF2 input files
Frequencies of European human SNPs and fixed differences (x=n) to chimpanzee that was used as input file for SweepFinder2. Original data from: Drmanac R, Sparks AB, Callow MJ et...
