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The Graphical Horseshoe Estimator for Inverse Covariance Matrices
We develop a new estimator of the inverse covariance matrix for high-dimensional multivariate normal data using the horseshoe prior. The proposed graphical horseshoe estimator... -
Supplementary Data 1
Supplementary Data 1. Raw fossil data. Repository and Specimen indicate the collection in which specimen is held and its specimen number. Family, Subfamily, Tribe, Genus, and... -
Additional data
This repository provides the supplementary R code and data to reproduce the experiments in the following paper : "Highly accurate autonomic diagnosis of papillary thyroid... -
Supplemental Dataset 4
Supplemental Data. Walker et al. (2017). Plant Cell 10.1105/tpc.16.00961. Supplemental Dataset 4. GO term overrepresentation analysis. GO terms (biological process/molecular... -
High serum MMP-14 predicts worse survival in gastric cancer data
High serum MMP-14 predicts worse survival in gastric cancer data -
manuscript_data
Data used in preparation of Figs 1F, 1G; 2E; 3B, 3C; 4D, 4E; 5C, 5E, 5G, 5I and 5K. (XLSX) -
dedup_wf_001--39f4751c821ddb7f1f0a1b7f72de9da9
Hetnetpy metaedge summary. Network summary of edge and node counts for each gene set collection. -
Additional file 5 of Compressing gene expression data using multiple latent s...
Tissue types and counts for TARGET, TCGA, and GTEx. -
Marker file for CanineHD array from 24 dingoes (bim)
.bim file for CanineHD array data from 24 dingoes. Created in PLINK. -
Data files used in the paper
Each file corresponds to a MARSIS radar acquisition on the Ultima Scopuli on Mars. The Data are in ASCII format and they organized as a follow: first row: operating frequency... -
Figure 5 code
This file includes the code used to create Figure 5. It includes the life cycle loop iterated over multiple generations. -
Additional File 2:
Table S1. Description of all the covariates used in the study. Table S2. Spearman correlations of all the covariates with four α-diversity metrics. Table S3. Results of... -
Additional file 4 of Compressing gene expression data using multiple latent s...
Model coefficients for predicting TP53 loss of function. Using all compressed features in the model implicates compressed features with cancer hallmark signatures. Associated... -
dedup_wf_001--f4b40575eb9c1dd4cd5bad9338e327b0
FASTA format alignments for 151 protein-coding using three assembly methods: consensus, ambiguity (iupac), and allele phasing. Alleles for each individual are annotated as _h1... -
Additional file 7: of Mapping the genomic mosaic of two ‘Afro-Bolivians’ from...
Ancestry memberships as computed using the unsupervised clustering algorithm from ADMIXTURE and a large dataset representing main sub-continental African regions and the Tocaña,... -
All data files
Data files are associated with Table 2, Figure 1, Figure 2, Appendix C and Appendix D. Please see ReadMe.txt for further information. -
Full Data-Set
Full dataset used in the analyses column #1: total mass of focal seeds (of paternal genotype i) on a given ear column #2: number of focal seeds (of paternal genotype i) on a... -
Figure 3 raw data
Raw experimental and computational data presented in Figure 3. Figure 3. Rab5:GDI activation is tuned by free Rab5:GDP abundance. (A) Rab5 cycles between the membrane and... -
Gene expression data
Typical example of the gene expression data obtained from microarray experiments. Each number represents the change (increase or decrease) of the gene expression level of the...
