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Independent modulation of individual genomic component transcription and a ci...
Abstract Background The genome of Banana bunchy top virus (BBTV) consists of at least six circular, single-stranded DNA components of ~ 1 kb in length. Some BBTV isolates may... -
Complete blood count data and leukocyte expression of cytokine genes and cyto...
Abstract Objective The purpose of this study was to evaluate potential relationships between cytokine gene expression, complete blood counts (CBC) and animals that were sick or... -
Additional file 1: Table S1. of De novo assembly and an...
List of annotated unigenes and lists of up-regulated genes and down-regulated genes in chilling-treated samples. (XLS 14564 kb). -
Additional file 1: of Platform-independent gene expression signature differen...
Table S1. The list of qRT-PCR primers for signature genes. Table S2. Normalized expression levels (median and MAD) obtained by qRT-PCR from 45 independent FFPE samples and the... -
Additional file 2: of 3CPET: finding co-factor complexes from ChIA-PET data u...
Excel file listing the inferred ER-alpha and RNAP-II related networks. (XLSX 35 kb) -
Additional file 4: Table S2. of De novo transcriptome sequencing and gene exp...
List of Elymus nutans transcriptome annotations. (XLSX 10 kb) -
Additional file 3: of The imbalance in the complement system and its possible...
Table S3A. Proteogenomics profiling of the expression of complement and complement- related components in patients with lung cancer. Table S3B. Median mRNA and protein levels in... -
dedup_wf_001--c17aeabb68855f0e9598bdba1b82e8da
Figure S1. A, IF analysis of CD49f and ERα co-expression in prostate tissues, enriched stem cell spheres of LNCaP-abl (PCSCs), LNCaP-abl or PC3 cells. Scale bar, 50 μm. B, Mean... -
Additional file 2: Table S2. of Identification and annotation of conserved pr...
Table S2A â Locations of FANTOM5 human promoters mapped to the pig genome. Table contains the following columns (left to right): FANTOM5 human promoter ID, Ensembl gene ID... -
Transcriptional activation of USP16 gene expression by NFκB signaling
Abstract Ubiquitin Specific Peptidase 16 (USP16) has been reported to contribute to somatic stem-cell defects in Down syndrome. However, how this gene being regulated is largely... -
MOESM2 of A comprehensive epigenome map of Plasmodium falciparum reveals uniq...
Additional file 2: Table S5. List of genes and their co-ordinates for each cluster is provided in a separate excel file. -
Additional file 6: of The initial deficiency of protein processing and flavon...
Length distribution of small RNAs. (JPG 560 kb) -
dedup_wf_001--586ff74f769f76e381682b1c867b969a
Heat map of expression profiles of DEGs involved in the photosynthesis. According to their expression pattern under cold stress, the 472 DEGs were categorized in to two groups,... -
Additional file 13: Table S9. of Dynamic transcriptome and DNA methylome anal...
The differentially methylated regions (DMRs) in 120 and 240 days old Laiwu pigs. The DMRs were generated by sequencing depth ≥ 10×, at least 3 DMCs, meanwhile the minimum value... -
Additional file 3: of Transcriptome analysis reveals regulatory framework for...
Figure S2. Hierarchical cluster analysis of differentially expressed genes encoding (a) receptor like kinases, (b) Ca2+ related kinases, (c) E3 ubiquitin ligases, and (d)... -
Murine intestinal organoids resemble intestinal epithelium in their microRNA ...
Intestinal organoids were established as an ex vivo model of the intestinal epithelium. We investigated whether organoids resemble the intestinal epithelium in their microRNA... -
Dimerized translationally controlled tumor protein increases interleukin-8 ex...
Abstract Background Histamine releasing factor (HRF) is a unique cytokine known to regulate a variety of immune cells in late allergic reactions. In the previous study, we... -
Additional file 3:Â Dataset 1. of A critical role for the Drosophila dopamine...
Summary of microarray data. (XLSX 61 kb) -
Confident gene activity prediction based on single histone modification H2BK5...
Abstract Background The histones in the core of nucleosomes may be subject to covalent post-transcriptional modifications. These modifications are thought to correlate with and... -
miR-122 regulates the JAK-STAT signalling pathway by down-regulating <i>EPO</...
MicroRNA (miRNA) are single-stranded non-coding RNA of approximately 22 nucleotides estimated to regulate 60% of human and animal genes some of which are associated with cell...