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bigSCale2
Framework for clustering, phenotyping, pseudotiming and inferring gene regulatory networks from single cell data. -
Source Code For "A Comparative Study Of Endoderm Differentiation In Humans An...
Source code for the publication, "A comparative study of endoderm differentiation in humans and chimpanzees". -
Code for Quantum Simulation of Attosecond Physics
Code for Quantum Simulation of Attosecond Physics Author: Md Masudur Rahman This collection contains the code implementation and individual figure files for the report... -
PathfinderTURB for CHM15K ceilometers
The PathfinderTURB algorithm is coded in MATLAB and requires a certain number of toolboxes. The version of PathfinderTURB available here is for any type of CHM15K, if someone... -
phenoCDM: Continuous Development Models for Incremental Time-Series Analysis
Using the Bayesian state-space approach, we developed a continuous development model to quantify dynamic incremental changes in the response variable. While the model was... -
Tracks position of a carbon flame, puts info into history file, and more
MESA run_star_extra to tracks the position of a carbon flame, puts info into history file, and more -
Do the Dependency Conflicts in My Project Matter?
The paper focuses on dependency conflicts – conflicts that occur when multiple versions of the same library or the same class exist in a class path of a Java project. The... -
github.com/denis-yuen/bcellmagic
B cell repertoire analysis pipeline with immcantation framework. Usage: The typical command for running the pipeline is as follows: nextflow run... -
Isabelle/DOF
Isabelle/DOF is a Document Ontology Framework (DOF), on top of Isabelle/HOL, allowing to annotate text elements in formal developments with structured, typed meta-information... -
Mapelia and friends
This software was created to help with the development of 3D models of planets, moons and so on, used in the non-profit project A Touch of The Universe on educational... -
pdebuyl-lab/tidynamics: tidynamics release 1.0.1
Associated to JOSS publication https://doi.org/10.21105/joss.00877 -
PNNL-PREMIS/PREMIS-ghg: Biogeosciences final version
Release version cited in BG paper, https://doi.org/10.5194/bg-2019-218 -
Gcube Smart Executor Client
The gCube System - smart-executor-client -------------------------------------------------- Smart Executor Service Client Library This software is part of the gCube... -
TriScale - Source code and related artifacts
This repository contains artifacts related to TriScale (source code, notebooks, etc.). It is currently anonymous for double-blind review. TriScale: A Framework Supporting... -
SAMoS code accompanying paper Henkes, et al.. Nat. Comm. (2020)
This is a stripped-down version of the code used to produce simulation part of the paper: "Universal motion patterns in confluent cell monolayers" by Silke Henkes,... -
Gravity-Reservoirmodelling V1.1: Calculating Change In Gravity Signal From Ge...
Suite of four python scripts to take TOUGH2 (or other geothermal reservoir model) output and calculate changes in gravity. An example is included, as well as an example... -
Marislab/Pdx-Classification: Reproducible Machine Learning Classifier Analysis
Release Version 1.0 2018 Gregory Way, Jo Lynne Harenza, John Maris This release includes a complete reproducible analysis pipeline for the application of supervised machine... -
gCube 4.8.0 - catalogue-of-life-spd-plugin v. 1.8.0
The gCube System - catalogue-of-life-spd-plugin -------------------------------------------------- Catalogue Of Life Plugin This software is part of the gCube Framework... -
GOLEM, a MOOSE-based application
GOLEM is a numerical simulator for modelling coupled Thermo-Hydro-Mechanical processes in faulted geothermal reservoirs. The simulator is developed by Antoine B. Jacquey and...
