54 items found

Types: software Groups: Datacite figshare ZENODO Tags: 110309 Infectious Diseases 69999 Biological Sciences not elsewhere classified Genetics Sociology

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  • software

    Code for a microRNA Conservation Bioinformatics Collaboration Between the Van...

    This code repository is a part of the the microRNA conservation bioinformatics collaboration between the Van Vactor Lab and Wall Lab, including Elizabeth M. McNeill, Todd F....
  • software

    OpenMC 0.6.1

    New Features Coarse mesh finite difference (CMFD) acceleration no longer requires PETSc Statepoint file numbering is now zero-padded Python scripts now compatible with...
  • software

    iLCSoft/ConformalTracking: v01-10

    v01-10 2019-10-08 Remi Ete (PR#55) ConformalTracking processor: Use streamlog macros instead of raw calls 2019-09-09 Andre Sailer (PR#54) Add Parameter TooManyTracks to...
  • software

    ME-ICA/tedana: 0.0.6

    Release Notes We had several major changes this release, including: Changes PCA default component selection to MLE, with previous decision tree accessible through kundu_pca...
  • software

    YCM 0.1.1

    YCM 0.1.1 (2015-08-28) Release Notes Changes made since YCM 0.1.0 include the following. Build System If available, use the new MESSAGE_NEVER argument for the file(INSTALL)...
  • software

    Inovesa/Inovesa: 2016-11

    This feature level is described in the first paper (see https://arxiv.org/abs/1611.05293). It supports everything needed to do simulations of longitudinal phase space. Change...
  • software

    Codebase for reproducing FOCS and figures

    FOCS is a novel method for inferring enhancer-promoter interactions from a single omic dataset. For further information, please refer to our...
  • software

    neurostuff/NiMARE: Initial release

    Release Notes This is NiMARE's initial release. NiMARE is still alpha software, so the package may change dramatically from release to release and there may be bugs in the code....
  • software

    openPMD 1.1.0: Base paths for mesh- and particle-only files and updated attri...

    This release defines how to handle files that only contain mesh or particle records gracefully. New attributes have been defined to document software dependencies and utilized...
  • software

    gitter-lab/SINGE: Version 0.2.0

    Version 0.3.0 contains optimizations that greatly increase SINGE's speed but can change its output: Switch to single precision for the kernel matrix Set an upper bound...
  • software

    Poldracklab/Fmriprep: 1.0.12

    Release Notes A long overdue release. This release integrates the great work of @mgxd to provide results in the CIFTI/grayordinates format for surface-based analyses. It also...
  • software

    MorphoLibJ: MorphoLibJ 1.3.0

    MorphoLibJ libraray v1.3.0. New features: Interactive tool for watershed distance transform (2D/3D) Interactive tool for morphological reconstruction using manual markers...
  • software

    ReproZip: 1.0.8

    Behavior changes: No longer default to overwriting trace directories. ReproZip will ask what to do or exit with an error if one of --continue/--overwrite is not provided...
  • software

    Pooch: A friend to fetch your sample data files

    Does your Python package include sample datasets? Are you shipping them with the code? Are they getting too big? Pooch is here to help! It will manage a data registry by...
  • software

    MultiDOE: sampling technics on MATLAB/OCTAVE - v3.2

    MultiDOE This MATLAB/OCTAVE toolbox regroups many existing tools for generating sample points using many specific DOE techniques: Full factorial sampling Latin Hypercube...
  • software

    Inovesa: Gamma Three

    Changes since v1.0.2 Fixed statistical moments when normalisation is lost Made time printing safe for multi-threading Updated readme Changes since v1.0.1 Improved...
  • software

    Poldracklab/Fmriprep: 1.0.0

    Release notes FMRIPREP 1.0.0, codename "BOLD raccoon", is the first official release of FMRIPREP. FMRIPREP "BOLD" is the outcome of a thorough testing process to assess that...
  • software

    Dealii: Deal.Ii Version 8.4.2

    The major changes of this release are: Parallel triangulations can now be partitioned in ways that allow weighting cells differently. Improved support for complex numbers...
  • software

    github.com/denis-yuen/bcellmagic

    B cell repertoire analysis pipeline with immcantation framework. Usage: The typical command for running the pipeline is as follows: nextflow run...
  • software

    gCube 4.0.0 - Document Store CouchBase Connector v. 1.1.0

    The gCube System - Document Store CouchBase Connector -------------------------------------------------- Document Store Connector for CouchBase This software is part of...