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dedup_wf_001--8f19a8c97b2674ca9e1aefe9695a9ced
Compressed file containing: 1) Forward sequence file 2) Reverse sequence file 3) File with experiment name, sample name and the tags, the forward primer and the reverse primer... -
dedup_wf_001--c2b390cb87fd9c9a7588499bf5e15814
Restart files and input files for the v1306 scenario from level 13 to level 15 -
Run5
Compressed file containing: 1) Forward sequence file 2) Reverse sequence file 3) File with experiment name, sample name and the tags, the forward primer and the reverse primer... -
dedup_wf_001--2f4ed80b1609181053daf7deb267af5e
Structure input file. The four populations correspond to the "Group" column in the file Individuals_info.txt -
Additional file 1 of Comparison of surveillance-based metrics for the assessm...
Scripts for the statistical software R. The zip-file contains the analysis for the simulation. For detailed instructions unzip the file and refer to the readme.txt file. (ZIP 4 kb) -
dedup_wf_001--85d4d1d23533098f3bb15e5c37dcdac5
Updated R analysis file (MusselTracker_workup.Rnw) and accompanying data files for the MusselTracker project. See the README.md file for information on the files contained with.... -
AllForward option file
Example of an option file to give instructions to AllForward.exe. This file should be placed in the same folder as the program AllForward.exe for the options to be read. This... -
De Jong and Fowler data archive
The first worksheet in this Excel file has the data we analyzed for this paper. The second worksheet in this Excel file has metadata (variable codes, etc.) for this data set. -
Matlab code for two patch model run first
This generates the matrices and information that is later used in the patches-analysis.m file. So run this file first. -
dedup_wf_001--4ff8b7004cd777298251d90ad049dd97
Output phylogenetic tree file from the program SNAPP, based on data and parameters in the input file Dataset_S4. -
dedup_wf_001--7d1ea81376fb3bea98a4c99fcf892f16
The haplotype file which is part of the input to Arlequin. Note you need the Arlequin project file to be in the same directory. -
Read_Me
This read-me file contains detailed descriptions of all data and script files accompanying this manuscript. -
dedup_wf_001--d718f065e48965a3f7f8ab11beaace1f
Tar archive containing raw data for Dataset 7 in the form of 4 .sff files. Corresponding mapping files for demultiplexing are provided for each data file. -
raw_data
Contains six tab-delimited files with all data used in this analysis. See README file for details.
